correct_magnetic_basline.m

@@ -1,12 +1,13 @@
-function [dataOUT] = correct_magnetic_basline(dataIN)
+function [dataOUT,params] = correct_magnetic_basline(dataIN,params)
 %CORRECT_MAGNETIC_BASLINE UI for basline correction along field axis
 %
-%   Usage: [dataOUT] = CORRECT_MAGNETIC_BASLINE(dataIN), where dataIN is a
+%   Usage: [dataOUT,params] = CORRECT_MAGNETIC_BASLINE(dataIN,params), where
-%   dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
+%   dataIN is a dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
 %
 %   The function will show the input data and offer an input field, where
 %   the number of field basline points should be set. By pressing "Apply" the
 %   correction will be executed and the graph changes to the corrected data.
+%   The number of field baseline points will also be appended to the params struct.
 %   By pressing "Reset" the graph will return to show the original data.
 %   Exit the function by pressing "Done".
 
@@ -86,6 +87,8 @@ uiwait(fig)
         dataOUT_transp = dataOUT.';
         plot(ax,dataOUT_transp)
         axis tight
+        %writing parameter
+        params.No_field_basline_pts = field_baseline;
     end
 
     function FieldResetButtonPushed(src,event)

correct_time_baseline.m

@@ -1,12 +1,13 @@
-function [dataOUT] = correct_time_baseline(dataIN)
+function [dataOUT,params] = correct_time_baseline(dataIN,params)
 %CORRECT_TIME_BASELINE UI for basline correction along time axis
 %
-%   Usage: [dataOUT] = CORRECT_TIME_BASELINE(dataIN), where dataIN is a
+%   Usage: [dataOUT,params] = CORRECT_TIME_BASELINE(dataIN,params), where
-%   dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
+%   dataIN is a dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
 %
 %   The function will show the input data and offer an input field, where
 %   the number of pretrigger points should be set. By pressing "Apply" the
 %   correction will be executed and the graph changes to the corrected data.
+%   The number of pretigger points will also be appended to the params struct.
 %   By pressing "Reset" the graph will return to show the original data.
 %   Exit the function by pressing "Done".
 
@@ -82,6 +83,8 @@ uiwait(fig)
         %plotting result
         plot(ax,dataOUT)
         axis tight
+        %writing parameter
+        params.pretrigger = pretrigger;
     end
 
     function TimeResetButtonPushed(src,event)

normalize_data.m

@@ -1,13 +1,14 @@
-function [dataOUT] = normalize_data(dataIN)
+function [dataOUT,params] = normalize_data(dataIN,params)
 %NORMALISE_DATA normalizes data by max of region
 %
-%   Usage: [dataOUT] = NORMALISE_DATA(dataIN), where dataIN is a dataset
+%   Usage: [dataOUT,params] = NORMALISE_DATA(dataIN,params), where dataIN
-%   loaded via the LOAD_MATLAB or LOAD_BRUKER function.
+%   is a dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
 %
 %   The function will show the input data and offer two input fields, where
 %   the left and right borders of the maximum's region should be set.
 %   By pressing "Apply" the normalization will be executed and the graph
-%   changes to the normalized data.
+%   changes to the normalized data. The borders of the maximum region will
+%   also be appended to the params struct.
 %   By pressing "Reset" the graph will return to show the original data.
 %   Exit the function by pressing "Done".
 
@@ -91,6 +92,8 @@ uiwait(fig)
         %plotting result with time as x axis
         plot(ax,dataOUT)
         axis tight
+        %writing parameter
+        params.region_of_max = [left_point right_point];
     end
 
     function NormResetButtonPushed(src,event)