renamed function

normalize_data.m

@@ -1,109 +0,0 @@
-function [dataOUT,params] = normalize_data(dataIN,params)
-%NORMALISE_DATA normalizes data by max of region
-%
-%   Usage: [dataOUT,params] = NORMALISE_DATA(dataIN,params), where dataIN
-%   is a dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
-%
-%   The function will show the input data and offer two input fields, where
-%   the left and right borders of the maximum's region should be set.
-%   By pressing "Apply" the normalization will be executed and the graph
-%   changes to the normalized data. The borders of the maximum region and
-%   the mean of maximums will also be appended to the params struct.
-%   By pressing "Reset" the graph will return to show the original data.
-%   Exit the function by pressing "Done".
-
-%% creating UI
-fig = figure;
-fig.Name = 'Normalize Data';
-fig.Units = 'Normalized';
-fig.Position = [.2 .2 .6 .6];
-fig.Tag = 'Normalize';
-
-%panel for plot
-plotpanel = uipanel(fig);
-plotpanel.Units = 'Normalized';
-plotpanel.Position = [.01 .06 .98 .92];
-%axes for plot
-ax = axes(plotpanel);
-ax.XLabel.String = 'Time';
-ax.YLabel.String = 'Intensity';
-%plot current data in figure with time as x axis
-plot(ax,dataIN)
-axis tight
-
-%create push buttons
-a = uicontrol(fig,'Style','pushbutton');
-a.String = 'Apply';
-a.Units = 'Normalized';
-a.Position = [.52 .01 .15 .05];
-a.FontUnits = 'Normalized';
-a.FontSize = 0.6;
-a.Tag = 'Apply';
-a.Callback = @NormApplyButtonPushed;
-
-r = uicontrol(fig,'Style','pushbutton');
-r.String = 'Reset';
-r.Units = 'Normalized';
-r.Position = [.68 .01 .15 .05];
-r.FontUnits = 'Normalized';
-r.FontSize = 0.6;
-r.Tag = 'Reset';
-r.Callback = @NormResetButtonPushed;
-
-d = uicontrol(fig,'Style','pushbutton');
-d.String = 'Done';
-d.Units = 'Normalized';
-d.Position = [.84 .01 .15 .05];
-d.FontUnits = 'Normalized';
-d.FontSize = 0.6;
-d.Tag = 'Done';
-d.Callback = @NormDoneButtonPushed;
-
-%create input fields
-p1 = uicontrol(fig,'Style','edit');
-p1.String = 'Left point of max region';
-p1.Units = 'Normalized';
-p1.Position = [.01 .01 .24 .05];
-p1.HorizontalAlignment = 'left';
-p1.FontUnits = 'Normalized';
-p1.FontSize = 0.6;
-p1.Tag = 'MaxRegionLeft';
-
-p2 = uicontrol(fig,'Style','edit');
-p2.String = 'Right point of max region';
-p2.Units = 'Normalized';
-p2.Position = [.25 .01 .24 .05];
-p2.HorizontalAlignment = 'left';
-p2.FontUnits = 'Normalized';
-p2.FontSize = 0.6;
-p2.Tag = 'MaxRegionRight';
-
-uicontrol(p1); %passes focus to first input
-uiwait(fig)
-
-%% Callback functions
-    function NormApplyButtonPushed(~,~)
-        left_point = str2double(get(p1,'String'));
-        right_point = str2double(get(p2,'String'));
-        %take mean of each field line between specified min and max time
-        maxima_mean = mean(dataIN([left_point right_point],:));
-        %normalize amplitude to 1 by dividing by max of means
-        dataOUT = dataIN / max(maxima_mean);
-        %plotting result with time as x axis
-        plot(ax,dataOUT)
-        axis tight
-        %writing parameter
-        params.region_of_max = [left_point right_point];
-        params.max_mean = maxima_mean / max(maxima_mean);
-    end
-
-    function NormResetButtonPushed(~,~)
-        plot(ax,dataIN)
-        axis tight
-    end
-
-    function NormDoneButtonPushed(~,~)
-        close 'Normalize Data'
-    end
-
-end