Finished UI based correction, including reset button.

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sakul-45 2021-07-07 14:38:39 +02:00
parent 4520e1e1d4
commit f660db6d96

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@ -1,42 +1,97 @@
function [dataOUT] = correct_time_baseline(dataIN)
%CORRECT_TIME_BASELINE Summary of this function goes here
% Detailed explanation goes here
%CORRECT_TIME_BASELINE UI for basline correction along time axis
%
% Usage: [dataOUT] = CORRECT_TIME_BASELINE(dataIN), where dataIN is a
% dataset loaded via the LOAD_MATLAB or LOAD_BRUKER function.
%
% The function will show the raw data and offer an input field, where the
% number of pretrigger points should be set. By pressing "Apply" the
% correction will be executed and the graph changes to the corrected data.
% By pressing "Reset" the graph will return to show the original data.
% Exit the function by pressing "Done".
%Create figure
f = figure('Units','Normalized',...
'Position',[.3 .3 .4 .4],...
'NumberTitle','off',...
'Name','Choose Pretrigger');
%input field
inp = uicontrol('Style','Edit',...
'Units','Normalized',...
'Position',[.025 .025 .7 .05],...
'Tag','myedit');
%"Done" button
p = uicontrol('Style','PushButton',...
'Units','Normalized',...
'Position',[.75 .025 .225 .05],...
'String','Done',...
'CallBack','uiresume(gcbf)');
%% creating UI
fig = figure;
fig.Name = 'Correct Time Baseline';
fig.Units = 'Normalized';
fig.Position = [.2 .2 .6 .6];
fig.Tag = 'CorrTimeBase';
%panel for plot
plotpanel = uipanel(fig);
plotpanel.Units = 'Normalized';
plotpanel.Position = [.01 .06 .98 .92];
%axes for plot
ax = axes(f,'Units','Normalized',...
'Position',[.05 .125 .925 .85]);
ax = axes(plotpanel);
ax.XLabel.String = 'Time';
ax.YLabel.String = 'Intensity';
%plot current data in figure
plot(ax,dataIN)
axis tight
%wait until button pressed
uiwait(f)
pretrigger = str2double(get(inp,'String'));
%timeline CORRECTING
data_size = size(dataIN);
dataOUT = zeros(data_size);
for n = 1:data_size(2)
column_mean = mean(dataIN(1:pretrigger,n));
dataOUT(:,n) = dataIN(:,n) - column_mean;
end
%plotting result
plot(ax,dataOUT)
axis tight
%create push buttons
a = uicontrol(fig,'Style','pushbutton');
a.String = 'Apply';
a.Units = 'Normalized';
a.Position = [.52 .01 .15 .05];
a.FontUnits = 'Normalized';
a.FontSize = 0.6;
a.Tag = 'Apply';
a.Callback = @ApplyButtonPushed;
r = uicontrol(fig,'Style','pushbutton');
r.String = 'Reset';
r.Units = 'Normalized';
r.Position = [.68 .01 .15 .05];
r.FontUnits = 'Normalized';
r.FontSize = 0.6;
r.Tag = 'Reset';
r.Callback = @ResetButtonPushed;
d = uicontrol(fig,'Style','pushbutton');
d.String = 'Done';
d.Units = 'Normalized';
d.Position = [.84 .01 .15 .05];
d.FontUnits = 'Normalized';
d.FontSize = 0.6;
d.Tag = 'Done';
d.Callback = @DoneButtonPushed;
%create input field
inp = uicontrol(fig,'Style','edit');
inp.Units = 'Normalized';
inp.Position = [.01 .01 .5 .05];
inp.HorizontalAlignment = 'left';
inp.FontUnits = 'Normalized';
inp.FontSize = 0.6;
inp.Tag = 'TimePoints';
uicontrol(inp); %passes focus to input
uiwait(fig)
%% Callback functions
function ApplyButtonPushed(src,event)
pretrigger = str2double(get(inp,'String'));
%timeline CORRECTING
data_size = size(dataIN);
dataOUT = zeros(data_size);
for n = 1:data_size(2)
column_mean = mean(dataIN(1:pretrigger,n));
dataOUT(:,n) = dataIN(:,n) - column_mean;
end
%plotting result
plot(ax,dataOUT)
axis tight
end
function ResetButtonPushed(src,event)
plot(ax,dataIN)
axis tight
end
function DoneButtonPushed(src,event)
close 'Correct Time Baseline'
end
end